MirGeneDB 2.1
MirGeneDB ID

Dme-Mir-317

Family name MIR-317 (all species)
Seed GAACACA
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-317
Paralogues
Orthologues Aae-Mir-317-P8  Aae-Mir-317-P9  Bge-Mir-317  Cgi-Mir-317-P1  Cgi-Mir-317-P2  Csc-Mir-317-P17  Csc-Mir-317-P18  Cte-Mir-317  Dan-Mir-317  Dma-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Efe-Mir-317-P5  Efe-Mir-317-P6  Efe-Mir-317-P7  Esc-Mir-317  Hme-Mir-317  Isc-Mir-317  Lan-Mir-317-P10  Lan-Mir-317-P11  Lgi-Mir-317  Lpo-Mir-317-P12  Lpo-Mir-317-P13  Npo-Mir-317  Obi-Mir-317  Ovu-Mir-317  Tca-Mir-317 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Drosophila_melanogaster_BDGP6)		 3R: 10091139-10091204 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-317)		 Mir-317 3R: 10091139-10091204 [+] UCSC Ensembl
Mir-277 3R: 10100039-10100102 [+] UCSC Ensembl
Mir-34 3R: 10100952-10101025 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAGCGAAUUUUCCAUAUGCAACUGCCAUUGGGAUACACCCUGUGCUCGCUUUGAAUGAAAUGCAAGCAAGUGAACACAGCUGGUGGUAUCCAGUGGCCGUUUGGCAUCCUUGCUGCACCACAAA
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Structure
        10        20          30        40          50        60 
AAAAGCGAAUUUUCCAUA   --   U         AUA    --|    C     UUGAAUGA 
                  UGC  AAC GCCAUUGGG   CACC  CUGUG UCGCU        A
                  ACG  UUG CGGUGACCU   GUGG  GACAC AGUGA        A
AAACACCACGUCGUUCCU   GU   C         AUG    UC^    A     ACGAACGU 
    120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo He L3 Fe Fe La Wh
Star sequence

Dme-Mir-317_5p*
mirBase accessionMIMAT0020843
Sequence 
0- UGGGAUACACCCUGUGCUCGCU -22
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Mature sequence

Dme-Mir-317_3p
mirBase accessionMIMAT0000409
Sequence 
42- UGAACACAGCUGGUGGUAUCCAGU -66
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Proposed targets microrna.org: MIMAT0000409
TargetScanFly: dme-miR-317