MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-317

Family name MIR-317 (all species)
Seed GAACACA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-317-P8  Aae-Mir-317-P9  Cgi-Mir-317-P1  Cgi-Mir-317-P2  Csc-Mir-317-P17  Csc-Mir-317-P18  Cte-Mir-317  Dan-Mir-317  Dma-Mir-317  Dme-Mir-317  Dmo-Mir-317  Dpu-Mir-317  Dsi-Mir-317  Dya-Mir-317  Efe-Mir-317-P5  Efe-Mir-317-P6  Efe-Mir-317-P7  Esc-Mir-317  Hme-Mir-317  Isc-Mir-317  Lan-Mir-317-P10  Lan-Mir-317-P11  Lgi-Mir-317  Lpo-Mir-317-P12  Lpo-Mir-317-P13  Npo-Mir-317  Obi-Mir-317  Ovu-Mir-317  Tca-Mir-317 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ615986.1: 65403-65466 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAAGUUGUGAAACAAUCCUGGUGUGGGACGGGGAGCCACACUGAGUUCACUCGAAUAUGAGAAACGAGUGAACACAGCUGGUGGUAUCUCAGUUUCAUGCCAGGCAUACCUACUCUAGGUCAU
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Structure
        10          20        30         40          50          
GCAAGUUGUGAAACAAU--         GG  G    -     A--|  A       CGAAUAU 
                   CCUGGUGUG  AC GGGA GCCAC   CUG GUUCACU       \
                   GGACCGUAC  UG CUCU UGGUG   GAC CAAGUGA       G
UACUGGAUCUCAUCCAUAC         UU  A    A     GUC^  A       GCAAAGA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-317_5p*
mirBase accessionNone
Sequence 
0- GGGGAGCCACACUGAGUUCACU -22
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Mature sequence

Bge-Mir-317_3p
mirBase accessionNone
Sequence 
39- UGAACACAGCUGGUGGUAUCUCAGU -64
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