| MirGeneDB ID | Npo-Mir-317 |
|---|---|
| Family name | MIR-317 (all species) |
| Seed | GAACACA |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aae-Mir-317-P8 Aae-Mir-317-P9 Bge-Mir-317 Cgi-Mir-317-P1 Cgi-Mir-317-P2 Csc-Mir-317-P17 Csc-Mir-317-P18 Cte-Mir-317 Dan-Mir-317 Dma-Mir-317 Dme-Mir-317 Dmo-Mir-317 Dpu-Mir-317 Dsi-Mir-317 Dya-Mir-317 Efe-Mir-317-P5 Efe-Mir-317-P6 Efe-Mir-317-P7 Esc-Mir-317 Hme-Mir-317 Isc-Mir-317 Lan-Mir-317-P10 Lan-Mir-317-P11 Lgi-Mir-317 Lpo-Mir-317-P12 Lpo-Mir-317-P13 Obi-Mir-317 Ovu-Mir-317 Tca-Mir-317 |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_018389105_NPO) |
JACATO010000333.1: 1089799-1089857 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | GUGCUUGAAGAUAAGAUUGUCAUGCGUGACAGGGUACCAUGAUGUGUUCCCAGUGUGAUGACGUGUGAACACAGCUGGUGGUAUCUGGUCUUGUGUGAGCAGAACAACAAUUUCAGGACGet precursor sequence |
| Structure | 10 20 30 40 50 GUGCUUGAAGAUAAGAU- - U A GA--| C GUGUG UG UCAUGCG GAC GGGUACCAU UGUGUUC CA \ AC AGUGUGU CUG UCUAUGGUG ACACAAG GU A CAGGACUUUAACAACAAG G U G GUCG^ U GCAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Npo-Mir-317_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGGGUACCAUGAUGUGUUCCCA -22
Get sequence
|
| Mature sequence | Npo-Mir-317_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- UGAACACAGCUGGUGGUAUCUGGU -59
Get sequence
|
