MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-193-P2a

Family name MIR-193 (all species)
Seed AAUGCCC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-193-P1a  Sha-Mir-193-P1b  Sha-Mir-193-P2b 
Orthologues Ami-Mir-193-P2a  Bge-Mir-193-P2  Bta-Mir-193-P2a  Cbr-Mir-193-P2-v1  Cbr-Mir-193-P2-v2  Cel-Mir-193-P2-v1  Cel-Mir-193-P2-v2  Cfa-Mir-193-P2a  Cgi-Mir-193-P2  Cli-Mir-193-P2a  Cmi-Mir-193-P2a  Cpi-Mir-193-P2a  Cpo-Mir-193-P2a  Cte-Mir-193-P2  Dno-Mir-193-P2a  Dre-Mir-193-P2a  Ebu-Mir-193-P2  Ete-Mir-193-P2a  Gga-Mir-193-P2a  Hme-Mir-193-P2  Hsa-Mir-193-P2a  Lch-Mir-193-P2a  Lgi-Mir-193-P2  Loc-Mir-193-P2a  Mdo-Mir-193-P2a  Mml-Mir-193-P2a  Mmu-Mir-193-P2a  Mun-Mir-193-P2a  Oan-Mir-193-P2a  Ocu-Mir-193-P2a  Pbv-Mir-193-P2a  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Rno-Mir-193-P2a  Sko-Mir-193-P2  Spt-Mir-193-P2a  Spu-Mir-193-P2  Sto-Mir-193-P2a  Tca-Mir-193-P2  Tgu-Mir-193-P2a  Xbo-Mir-193-P2  Xla-Mir-193-P2a3  Xla-Mir-193-P2a4  Xtr-Mir-193-P2a 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(DEVIL_add)		 GL841527.1: 142087-142147 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCCUGGCUCAUUACCGCAGGGAAAAUGAGGGACUUUUGGGGGCAGAUGUGUUUCCAUUACACUAUCAUAAUGCCCCUAAAAAUCCUUAUUGCUCUUGCAGUAUUCAUCUGUAUCUCUG
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Structure
        10          20        30        40        50        60 
CCUGCCUGGCUCAUUACC--|     AA        AC           GA    UUUCCAU 
                    GCAGGG  AAUGAGGG  UUUUGGGGGCA  UGUG       \
                    CGUUCU  UUAUUCCU  AAAAUCCCCGU  AUAC       U
GUCUCUAUGUCUACUUAUGA^     CG        A-           A-    UAUCACA 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-193-P2a_5p*
mirBase accessionNone
Sequence 
0- AGGGACUUUUGGGGGCAGAUGUG -23
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Mature sequence

Sha-Mir-193-P2a_3p
mirBase accessionNone
Sequence 
40- UAAUGCCCCUAAAAAUCCUUA -61
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