MirGeneDB 2.1
MirGeneDB ID

Ocu-Mir-194-P1

Family name MIR-194 (all species)
Seed GUAACAG
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-194
Paralogues Ocu-Mir-194-P2 
Orthologues Aca-Mir-194-P1  Ami-Mir-194-P1  Bta-Mir-194-P1  Cfa-Mir-194-P1  Cli-Mir-194-P1  Cmi-Mir-194-P1  Cpi-Mir-194-P1  Ebu-Mir-194-o1  Ete-Mir-194-P1  Gga-Mir-194-P1  Gja-Mir-194-P1  Hsa-Mir-194-P1  Lch-Mir-194-P1  Mml-Mir-194-P1  Mmu-Mir-194-P1  Mun-Mir-194-P1  Oan-Mir-194-P1  Pbv-Mir-194-P1  Pma-Mir-194-o1  Rno-Mir-194-P1  Spt-Mir-194-P1  Sto-Mir-194-P1  Tgu-Mir-194-P1  Xla-Mir-194-P1a  Xla-Mir-194-P1b  Xtr-Mir-194-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr16: 52957890-52957947 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P1)		 Mir-194-P1 chr16: 52957890-52957947 [+] UCSC Ensembl
Mir-192-P1 chr16: 52958506-52958565 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUUCAACUUGUUUAAUGGAGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUAUGUACCAAUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAACUUGCUACAACAUAAAA
Get precursor sequence
Structure
        10         20         30        40        50         
UCUUUCAACUUGUUUAA-   -| UU      U         A      G    CUAUGU 
                  UGG AG  AUCAAG GUAACAGCA CUCCAU UGGA      \
                  ACC UU  UAGUUU CAUUGUCGU GAGGUG ACCU      A
AAAAUACAACAUCGUUCA   A^ GG      U         A      -    UUAACC 
      110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-194-P1_5p
mirBase accessionMIMAT0048307
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Star sequence

Ocu-Mir-194-P1_3p*
mirBase accessionMIMAT0048308
Sequence 
36- CCAGUGGAGAUGCUGUUACUUU -58
Get sequence