| MirGeneDB ID | Lch-Mir-194-P1 |
|---|---|
| Family name | MIR-194 (all species) |
| Seed | GUAACAG |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-194-P2 |
| Orthologues | Aca-Mir-194-P1 Ami-Mir-194-P1 Bta-Mir-194-P1 Cfa-Mir-194-P1 Cli-Mir-194-P1 Cmi-Mir-194-P1 Cpi-Mir-194-P1 Ebu-Mir-194-o1 Ete-Mir-194-P1 Gga-Mir-194-P1 Gja-Mir-194-P1 Hsa-Mir-194-P1 Mml-Mir-194-P1 Mmu-Mir-194-P1 Mun-Mir-194-P1 Oan-Mir-194-P1 Ocu-Mir-194-P1 Pbv-Mir-194-P1 Pma-Mir-194-o1 Rno-Mir-194-P1 Spt-Mir-194-P1 Sto-Mir-194-P1 Tgu-Mir-194-P1 Xla-Mir-194-P1a Xla-Mir-194-P1b Xtr-Mir-194-P1 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (LatCha1_add) |
JH127009.1: 786089-786144 [-] Ensembl |
| Precursor (pre-Mir +30nt flank) | ACCUUGGACCAGUCAGCAGUGUGCUUCAGGUGUAACAGCAACUCCAUGUGGAUGGCAAUGGCUUCCAGUGGAGCUGCUGUUACUUUUGAUGGGCACUAACAGAUUGAAGGAAGCAAGet precursor sequence |
| Structure | 10 20 30 40 50 ACCUUGGACCAGUCAGCAGU --| U A G UGGCA GUGCU UCAGG GUAACAGCA CUCCAU UGGA \ CACGG AGUUU CAUUGUCGU GAGGUG ACCU A AACGAAGGAAGUUAGACAAU GU^ U C - UCGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Lch-Mir-194-P1_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- UGUAACAGCAACUCCAUGUGGAU -23
Get sequence
|
| Star sequence | Lch-Mir-194-P1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
34- CCAGUGGAGCUGCUGUUACUUU -56
Get sequence
|
