MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-194-P1

Family name MIR-194 (all species)
Seed GUAACAG
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-194-1
Paralogues Rno-Mir-194-P2 
Orthologues Aca-Mir-194-P1  Ami-Mir-194-P1  Bta-Mir-194-P1  Cfa-Mir-194-P1  Cli-Mir-194-P1  Cmi-Mir-194-P1  Cpi-Mir-194-P1  Ebu-Mir-194-o1  Ete-Mir-194-P1  Gga-Mir-194-P1  Gja-Mir-194-P1  Hsa-Mir-194-P1  Lch-Mir-194-P1  Mml-Mir-194-P1  Mmu-Mir-194-P1  Mun-Mir-194-P1  Oan-Mir-194-P1  Ocu-Mir-194-P1  Pbv-Mir-194-P1  Pma-Mir-194-o1  Spt-Mir-194-P1  Sto-Mir-194-P1  Tgu-Mir-194-P1  Xla-Mir-194-P1a  Xla-Mir-194-P1b  Xtr-Mir-194-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(rn6)		 chr13: 103250590-103250646 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUCUCCGUCAAGCUUAUGGAGUCAUCACGUGUAACAGCAACUCCAUGUGGACUGUGCACAGAUCCCAGUGGAGCUGCUGUUACUUUUGAUGGCCUCCAGCCUGCUACAAACACUGG
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Structure
        10         20         30        40        50        
GUUCUCCGUCAAGCUUA-    -|      CGU         A      GU   CUGUG 
                  UGGA GUCAUCA   GUAACAGCA CUCCAU  GGA     \
                  ACCU CGGUAGU   CAUUGUCGU GAGGUG  CCU     C
GGUCACAAACAUCGUCCG    C^      UUU         C      AC   AGACA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-194-P1_5p
mirBase accessionMIMAT0000869
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
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Proposed targets microrna.org: MIMAT0000869
TargetScanVert: rno-miR-194-5p
miRDB: MIMAT0000869
Star sequence

Rno-Mir-194-P1_3p*
mirBase accessionNone
Sequence 
35- CCAGUGGAGCUGCUGUUACUUU -57
Get sequence