MirGeneDB 2.1
MirGeneDB ID

Gga-Mir-194-P1

Family name MIR-194 (all species)
Seed GUAACAG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-194
Paralogues
Orthologues Aca-Mir-194-P1  Ami-Mir-194-P1  Bta-Mir-194-P1  Cfa-Mir-194-P1  Cli-Mir-194-P1  Cmi-Mir-194-P1  Cpi-Mir-194-P1  Ebu-Mir-194-o1  Ete-Mir-194-P1  Gja-Mir-194-P1  Hsa-Mir-194-P1  Lch-Mir-194-P1  Mml-Mir-194-P1  Mmu-Mir-194-P1  Mun-Mir-194-P1  Oan-Mir-194-P1  Ocu-Mir-194-P1  Pbv-Mir-194-P1  Pma-Mir-194-o1  Rno-Mir-194-P1  Spt-Mir-194-P1  Sto-Mir-194-P1  Tgu-Mir-194-P1  Xla-Mir-194-P1a  Xla-Mir-194-P1b  Xtr-Mir-194-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 3: 18902602-18902657 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-194-P1)		 Mir-194-P1 3: 18902602-18902657 [+] UCSC Ensembl
Mir-192-P1 3: 18902920-18902978 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUCAAGACAGACCACUGGUGCUCUCAUAUGUAACAGCAACUCCAUGUGGACUACACUGACUUCCAGUGGAGAUGCUGUUACUUUUGAUAGCGGCUCAAAGACUCCGGAUCAGCU
Get precursor sequence
Structure
        10         20         30        40        50        
CAUUCAAGACAGACCACU-  -|   C   UAU         A      G    CUACA 
                   GG UGCU UCA   GUAACAGCA CUCCAU UGGA     \
                   UC GCGA AGU   CAUUGUCGU GAGGUG ACCU     C
UCGACUAGGCCUCAGAAAC  G^   U   UUU         A      -    UCAGU 
    110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Ch He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-194-P1_5p
mirBase accessionMIMAT0001133
Sequence 
0- UGUAACAGCAACUCCAUGUGGAC -23
Get sequence
Proposed targets TargetScanVert: gga-miR-194
miRDB: MIMAT0001133
Star sequence

Gga-Mir-194-P1_3p*
mirBase accessionNone
Sequence 
34- CCAGUGGAGAUGCUGUUACUUU -56
Get sequence