| MirGeneDB ID | Npo-Bantam |
|---|---|
| Family name | BANTAM (all species) |
| Seed | GAGAUCA |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aae-Bantam Asu-Bantam-o1 Asu-Bantam-o2 Asu-Bantam-o3 Bge-Bantam Bpl-Bantam Cbr-Bantam-P1a Cbr-Bantam-P1b Cbr-Bantam-P2 Cbr-Bantam-P3 Cbr-Bantam-P4 Cel-Bantam-P1 Cel-Bantam-P2 Cel-Bantam-P3 Cel-Bantam-P4 Cel-Bantam-P5a Cel-Bantam-P5b Cel-Bantam-P5c Cgi-Bantam Csc-Bantam-P16 Csc-Bantam-P17 Cte-Bantam Dan-Bantam Dma-Bantam Dme-Bantam Dmo-Bantam Dpu-Bantam Dsi-Bantam Dya-Bantam Efe-Bantam-P6 Efe-Bantam-P7 Efe-Bantam-P8 Esc-Bantam Hme-Bantam Isc-Bantam-P9a Isc-Bantam-P9b Lan-Bantam Lgi-Bantam Lpo-Bantam-P10 Lpo-Bantam-P11 Lpo-Bantam-P12 Lpo-Bantam-P13 Lpo-Bantam-P14 Lpo-Bantam-P15 Ovu-Bantam Sme-Bantam-P18 Sme-Bantam-P19 Sme-Bantam-P20 Tca-Bantam |
| Node of Origin (locus) | Protostomia |
| Node of Origin (family) | Protostomia |
| Genome context (GCA_018389105_NPO) |
JACATO010001708.1: 33000-33061 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | GAGAAGGAAGACGGAGAGAAUCAGACAAAACCGGUGUUCACAGUGAUUUGGCAGAAUGUGAUAUAUUUCUGAGAUCAUUGUGAACACUGGUUUUGUUCCAUACGUCACGUGGUCAUCCAGACGet precursor sequence |
| Structure | 10 20 30 40 50 60 GAGAAGGAAGACGGAGAGAAUCA--| GG AUGUG GACAAAACCGGUGUUCACAGUGAUUU CAGA A UUGUUUUGGUCACAAGUGUUACUAGA GUCU U CAGACCUACUGGUGCACUGCAUACC^ -- UUAUA 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Npo-Bantam_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCGGUGUUCACAGUGAUUUGGCAGA -25
Get sequence
|
| Mature sequence | Npo-Bantam_3p (predicted) |
| mirBase accession | None |
| Sequence |
39- UGAGAUCAUUGUGAACACUGGUU -62
Get sequence
|
