MirGeneDB 2.1
MirGeneDB ID

Isc-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Deer tick (Ixodes scapularis)
MiRBase ID isc-mir-12
Paralogues
Orthologues Aae-Mir-12  Bge-Mir-12  Bpl-Mir-12  Cgi-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Esc-Mir-12  Hme-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Npo-Mir-12  Ovu-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Tca-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(IscaWI)		 DS942119: 45760-45819 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-12)		 Mir-12 DS942119: 45760-45819 [-] Ensembl
Mir-216-P2 DS942119: 46335-46394 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCCACGGCGAUCGCGUUGGGGCUGGGACUGAGUAUUACAUCAGGUACUGGUCUGGUUGCUGGGUACCAGUAUCUGUGUGAUAUUCACCCCUCGCCCCGGCUAAACUGCGAGCUUCAAG
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Structure
        10          20        30        40        50          
CGGCCACGGCGAUCGCG--|      U   AC           U           CUGGUU 
                   UUGGGGC GGG  UGAGUAUUACA CAGGUACUGGU      \
                   GGCCCCG UCC  ACUUAUAGUGU GUCUAUGACCA      G
GAACUUCGAGCGUCAAAUC^      C   CC           -           UGGGUC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Al Mi Mi Mi Sa Sa Sa Sa To
Mature sequence

Isc-Mir-12_5p
mirBase accessionMIMAT0012684
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
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Star sequence

Isc-Mir-12_3p*
mirBase accessionNone
Sequence 
38- CAGUAUCUGUGUGAUAUUCACC -60
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