MirGeneDB 2.1
MirGeneDB ID

Bge-Mir-12

Family name MIR-12 (all species)
Seed GAGUAUU
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-12  Bpl-Mir-12  Cgi-Mir-12  Csc-Mir-12  Cte-Mir-12  Dan-Mir-12  Dma-Mir-12  Dme-Mir-12  Dmo-Mir-12  Dpu-Mir-12  Dsi-Mir-12  Efe-Mir-12-P1  Efe-Mir-12-P2  Esc-Mir-12  Hme-Mir-12  Isc-Mir-12  Lan-Mir-12-P3  Lan-Mir-12-P4  Lgi-Mir-12  Lpo-Mir-12-P5  Lpo-Mir-12-P6  Lpo-Mir-12-P7  Lpo-Mir-12-P8  Npo-Mir-12  Ovu-Mir-12  Sme-Mir-12-P9  Sme-Mir-12-P10  Sme-Mir-12-P11  Tca-Mir-12 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ614411.1: 688819-688880 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUGACGCUUGUUGAUGGGCGUCGAGCCGUGAGUAUUACAUCAGGUACUGGUGAGACAUUAGAACAACCCAGUACUUGUGUUAUACUUUCGAUUCGGCUGCUCUUGCUCAUCCACCUAGAU
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Structure
        10         20         30        40        50        60 
UCUUGACGCUUGUUGAU-    -|    GC  U      U   U          UGAGACAU 
                  GGGC GUCGA  CG GAGUAU ACA CAGGUACUGG        \
                  CUCG CGGCU  GC UUCAUA UGU GUUCAUGACC        U
UAGAUCCACCUACUCGUU    U^    UA  U      U   -          CAACAAGA 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-12_5p
mirBase accessionNone
Sequence 
0- UGAGUAUUACAUCAGGUACUGGU -23
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Star sequence

Bge-Mir-12_3p*
mirBase accessionNone
Sequence 
40- CAGUACUUGUGUUAUACUUUCG -62
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