| MirGeneDB ID | Esc-Mir-1994-P1 |
|---|
| Family name |
MIR-1994 (all species) |
|---|
| Seed |
GAGACAG |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Esc-Mir-1994-P2
|
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| Orthologues |
Cgi-Mir-1994-P1
Cte-Mir-1994
Efe-Mir-1994
Lgi-Mir-1994-P1
Npo-Mir-1994-P1
Obi-Mir-1994-P1
Ovu-Mir-1994-P1
|
|---|
| Node of Origin (locus) |
Mollusca
|
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| Node of Origin (family) |
Lophotrochozoa
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Mir-1994-P1_pre_SRIE01053170.1:952555-952693: 39-101 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CAAUAAUUCAACGGAUACAGCCUCAUACCAAGGGCGGUUACUCUGUUCUGCUUGUUUGAACUUUACCCUCAUGAGACAGUGUGUCCUCCCUUGGAAUGGGGUUUUUUGAAGCAGCAGCGGCAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CAAUAAUUCAACGGAUAC--| A C U U U GCU UUUGAAC
AGCCUCAU CCAAGGG GG UAC CUGU CU UG \
UUGGGGUA GGUUCCC CC GUG GACA GA AC U
GACGGCGACGACGAAGUUUU^ A U U U - GU- UCCCAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Esc-Mir-1994-P1_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGGCGGUUACUCUGUUCUGCUUG -24
Get sequence
|
|---|
| Mature sequence |
Esc-Mir-1994-P1_3p |
| mirBase accession | None |
|---|
| Sequence |
41- UGAGACAGUGUGUCCUCCCUUG -63
Get sequence
|
|---|
