| MirGeneDB ID | Esc-Mir-1994-P2 |
|---|
| Family name |
MIR-1994 (all species) |
|---|
| Seed |
GAGACAG |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Esc-Mir-1994-P1
|
|---|
| Orthologues |
Cgi-Mir-1994-P2
Cte-Mir-1994
Efe-Mir-1994
Lgi-Mir-1994-P2
Npo-Mir-1994-P2
Obi-Mir-1994-P2
Ovu-Mir-1994-P2
|
|---|
| Node of Origin (locus) |
Mollusca
|
|---|
| Node of Origin (family) |
Lophotrochozoa
|
|---|
Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Mir-1994-P2_pre_SRIE01053170.1:946396-946538: 43-101 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCAUCACAGGAAUUCAAGGCUAAAAUUCUCAGGUAGUACAAACUGUCUGCACGUUUGCAUUCGACUGUGAGACAGUGUGUCCUCCCUCAGAAGUAAUCAUGGCCAAUGCCGUCAUUGGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCAUCACAGGAAUUCAAGGCUAAAA--| C U U A G UUUGC
UUCU AGG AG ACA ACUGUCU CACG A
AAGA UCC UC UGU UGACAGA GUGU U
AGGUUACUGCCGUAACCGGUACUAAUG^ C C C G - CAGCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Esc-Mir-1994-P2_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUAGUACAAACUGUCUGCACG -23
Get sequence
|
|---|
| Mature sequence |
Esc-Mir-1994-P2_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGAGACAGUGUGUCCUCCCUCA -59
Get sequence
|
|---|
