| MirGeneDB ID | Cte-Mir-67 |
| Family name |
MIR-67 (all species) |
| Seed |
CACAACC |
| Species |
Polychaete worm (Capitella teleta) |
| MiRBase ID |
cte-mir-67
|
| Paralogues |
|
| Orthologues |
Aae-Mir-67-v1
Aae-Mir-67-v2
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Cgi-Mir-67-P4
Cgi-Mir-67-P5
Cgi-Mir-67-P6
Csc-Mir-67
Dan-Mir-67-v1
Dan-Mir-67-v2
Dma-Mir-67
Dme-Mir-67-v1
Dme-Mir-67-v2
Dme-Mir-67-v3
Dmo-Mir-67-v1
Dmo-Mir-67-v2
Dpu-Mir-67
Dsi-Mir-67-v1
Dsi-Mir-67-v2
Dsi-Mir-67-v3
Dya-Mir-67-v1
Dya-Mir-67-v2
Dya-Mir-67-v3
Efe-Mir-67-P1
Efe-Mir-67-P2
Efe-Mir-67-P3
Hme-Mir-67-v1
Hme-Mir-67-v2
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Lpo-Mir-67-P7
Lpo-Mir-67-P8
Lpo-Mir-67-P9
Lpo-Mir-67-P10
Lpo-Mir-67-P11
Npo-Mir-67
Obi-Mir-67
Ovu-Mir-67
Sme-Mir-67
Tca-Mir-67-v1
Tca-Mir-67-v2
Tca-Mir-67-v3
|
| Node of Origin (locus) |
Protostomia
|
| Node of Origin (family) |
Protostomia
|
Genome context (Capitella_teleta_v1.0) |
CAPTEscaffold_664: 25476-25536 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAUUUCUUUGGCAAUCUGCCCAGCGAUCUUACCUCAUUCAGUGGUGUUGCGAUGCUGGAAGCGCUCAUCACAACCUGCAUGAAUGAGGUAAGGUCAUGGAGCAUGCGCAACCAACGCCUCA
Get precursor sequence
|
| Structure | 10 20 30 40 50
CAUUUCUUUGGCAAUCU-- -| GC - UG U C CUGGA
GC CCA GAUCUUACCUCAUUCA G G GUUG GAUG \
CG GGU CUGGAAUGGAGUAAGU C C CAAC CUAC A
ACUCCGCAACCAACGCGUA A^ A- A GU - A UCGCG
. 110 100 90 80 70 |
| Deep sequencing |
Go to detailed chart
|
| 3' NTU |
No
|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
| Star sequence |
Cte-Mir-67_5p* |
| mirBase accession | None |
| Sequence |
0- ACCUCAUUCAGUGGUGUUGCGAUG -24
Get sequence
|
| Mature sequence |
Cte-Mir-67_3p |
| mirBase accession | MIMAT0009675 |
| Sequence |
37- UCACAACCUGCAUGAAUGAGGUAA -61
Get sequence
|