MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-450-P3b

Family name MIR-450 (all species)
Seed UUUGCAG
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-450-P1a  Rno-Mir-450-P1b  Rno-Mir-450-P2a  Rno-Mir-450-P2b  Rno-Mir-450-P3a 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Hsa-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3 
Node of Origin (locus) R. norvegicus
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 158153555-158153611 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3b)		 Mir-15-P1c4 chrX: 158148183-158148240 [+] UCSC Ensembl
Mir-15-P2c4 chrX: 158148481-158148543 [+] UCSC Ensembl
Mir-542-P1c chrX: 158152156-158152216 [+] UCSC Ensembl
Mir-450-P2b chrX: 158153394-158153450 [+] UCSC Ensembl
Mir-542-P1b chrX: 158158895-158158955 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGUAAUAGGAAUCAGAUACGGAAUUCUUUUUGCAGUAUGUUCCUGUAUAAGAACAUAAGCGUAUUGGGAACAUUUGGCAUACAUAAUUUUGUAUCAAUAUAUGGGGAGGGAGAC
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Structure
        10          20        30        40         50       
UUUUGUAAUAGGAAUCA--           CUUUU   AGU        -|   AAGAA 
                   GAUACGGAAUU     UGC   AUGUUCCU GUAU     C
                   CUAUGUUUUAA     ACG   UACAAGGG UAUG     A
CAGAGGGAGGGGUAUAUAA           UACAU   GUU        U^   CGAAU 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
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Mature sequence

Rno-Mir-450-P3b_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUUGCAGUAUGUUCCUGUAU -21
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Star sequence

Rno-Mir-450-P3b_3p* (predicted)
mirBase accessionNone
Sequence 
35- AUUGGGAACAUUUGGCAUACAU -57
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