MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-450-P2a

Family name MIR-450 (all species)
Seed UUGGGAA
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-450-P1a  Rno-Mir-450-P1b  Rno-Mir-450-P2b  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Orthologues Bta-Mir-450-P2  Cfa-Mir-450-P2  Cpo-Mir-450-P2  Dno-Mir-450-P2  Hsa-Mir-450-P2  Mml-Mir-450-P2  Mmu-Mir-450-P2  Ocu-Mir-450-P2 
Node of Origin (locus) R. norvegicus
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 158589777-158589833 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P2a)		 Mir-15-P1c3 chrX: 158584564-158584621 [+] UCSC Ensembl
Mir-15-P2c3 chrX: 158584862-158584924 [+] UCSC Ensembl
Mir-542-P1a chrX: 158588539-158588599 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAGCCCCACUAAAGAGAGAUGCGGAGCUGUUUUUGCGAUGUGUUCGUAAUGUGUGCUACAAUUAUAUUGGGAACAUUUUGCAUAAAUAGUUUUACAUCGACACACAGGCAAAGGUUG
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Structure
        10          20        30        40        50        
UAGCCCCACUAAAGAGA--|   CG         U     U      G      GUGCU 
                   GAUG  GAGCUGUUU UGCGA GUGUUC UAAUGU     \
                   CUAC  UUUGAUAAA ACGUU UACAAG GUUAUA     A
GUUGGAAACGGACACACAG^   AU         U     U      G      UUAAC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
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Star sequence

Rno-Mir-450-P2a_5p* (predicted)
mirBase accessionNone
Sequence 
0- UUUUGCGAUGUGUUCGUAAUGU -22
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Mature sequence

Rno-Mir-450-P2a_3p
mirBase accessionNone
Sequence 
35- AUUGGGAACAUUUUGCAUAAAU -57
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