MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-450-P3a

Family name MIR-450 (all species)
Seed UUUGCAG
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues Rno-Mir-450-P1a  Rno-Mir-450-P1b  Rno-Mir-450-P2a  Rno-Mir-450-P2b  Rno-Mir-450-P3b 
Orthologues Bta-Mir-450-P3  Cfa-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Hsa-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3 
Node of Origin (locus) R. norvegicus
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 158589938-158589994 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3a)		 Mir-15-P1c3 chrX: 158584564-158584621 [+] UCSC Ensembl
Mir-15-P2c3 chrX: 158584862-158584924 [+] UCSC Ensembl
Mir-542-P1a chrX: 158588539-158588599 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUGUAAUAGGAAUCAGAUACGGAAUUCUUUUUGCAGUAUGUUCCUGUAUAAGAACAUAAGCGUAUUGGGAACAUUUGGCAUACAUAAUUUUGUAUCAAUAUAUGGGGAGGGAGAC
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Structure
        10          20        30        40         50       
UUUUGUAAUAGGAAUCA--           CUUUU   AGU        -|   AAGAA 
                   GAUACGGAAUU     UGC   AUGUUCCU GUAU     C
                   CUAUGUUUUAA     ACG   UACAAGGG UAUG     A
CAGAGGGAGGGGUAUAUAA           UACAU   GUU        U^   CGAAU 
     110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
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Mature sequence

Rno-Mir-450-P3a_5p (predicted)
mirBase accessionNone
Sequence 
0- UUUUGCAGUAUGUUCCUGUAU -21
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Star sequence

Rno-Mir-450-P3a_3p* (predicted)
mirBase accessionNone
Sequence 
35- AUUGGGAACAUUUGGCAUACAU -57
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