MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-450-P3

Family name MIR-450 (all species)
Seed UUUGCAA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-450b
Paralogues Cfa-Mir-450-P1  Cfa-Mir-450-P2 
Orthologues Bta-Mir-450-P3  Cpo-Mir-450-P3  Dno-Mir-450-P3  Hsa-Mir-450-P3  Mml-Mir-450-P3  Mmu-Mir-450-P3  Ocu-Mir-450-P3  Rno-Mir-450-P3a  Rno-Mir-450-P3b 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chrX: 105177287-105177344 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-450-P3)		 Mir-450-P3 chrX: 105177287-105177344 [-] UCSC Ensembl
Mir-450-P2 chrX: 105177456-105177512 [-] UCSC Ensembl
Mir-542-v1 chrX: 105178359-105178417 [-] UCSC Ensembl
Mir-542-v2 chrX: 105178360-105178416 [-] UCSC Ensembl
Mir-15-P2c chrX: 105183139-105183201 [-] UCSC Ensembl
Mir-15-P1c chrX: 105183436-105183494 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUAAGUAAUAAGGGUAAGGUACAAAAUUAUUUUUGCAAUAUGUUCCUGAAUAUGUAAUAUAAGUGUAUUGGGAACAUUUUGCAUCCAUAGUUUUGUAUCAAUAUUUAGAGAAAAGGCU
Get precursor sequence
Structure
        10          20        30        40         50        
AUAAGUAAUAAGGGUAA--             UUU     U       UG -|   GUAA 
                   GGUACAAAAUUAU   UGCAA AUGUUCC  A AUAU    \
                   CUAUGUUUUGAUA   ACGUU UACAAGG  U UGUG    U
UCGGAAAAGAGAUUUAUAA             CCU     U       GU A^   AAUA 
      110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 and -2.
3' NTU No
MotifsNo
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-450-P3_5p
mirBase accessionMIMAT0006748
Sequence 
0- UUUUGCAAUAUGUUCCUGAAUAUG -24
Get sequence
Proposed targets TargetScanVert: cfa-miR-450b
miRDB: MIMAT0006748
Star sequence

Cfa-Mir-450-P3_3p*
mirBase accessionNone
Sequence 
35- UAUUGGGAACAUUUUGCAUCCAU -58
Get sequence