| MirGeneDB ID | Loc-Mir-2184 |
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| Family name |
MIR-2184 (all species) |
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| Seed |
ACAGUAA |
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| Species |
Spotted gar (Lepisosteus oculatus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Ami-Mir-2184
Cmi-Mir-2184-v1
Cmi-Mir-2184-v2
Cpi-Mir-2184
Dre-Mir-2184-P1a
Dre-Mir-2184-P1b
Gga-Mir-2184
Gmo-Mir-2184
Lch-Mir-2184
Mal-Mir-2184-P1
Mal-Mir-2184-P2
Mun-Mir-2184
Tni-Mir-2184-P1
Xla-Mir-2184-P3
Xla-Mir-2184-P4
Xtr-Mir-2184
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Gnathostomata
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Genome context
(LepOcu1) |
LG22: 10129912-10129973 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGACAGCAGUGAGACCCUGACCUCCCCCCGAACAGUAAGAGUUUAUGUGCUGUGGGCACCUCAGGAUCCAGCGCAUAGCCUCUUACAGUGCAGGGAGAAGUGUCACUGGGACACGCCGGGAC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UGACAGCAGUGAGACCCU - -| C CGA A U UGGGCAC
GAC C UC CCC AC GUAAGAG UUAUGUGCUG C
CUG G AG GGG UG CAUUCUC GAUACGCGAC U
CAGGGCCGCACAGGGUCA U A^ A ACG A C CUAGGAC
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut -1 on both arms. |
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Br |
Br |
He |
He |
He |
He |
Ov |
Ov |
Ov |
Ov |
Te |
Te |
Te |
Te |
To |
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| Mature sequence |
Loc-Mir-2184_5p |
| mirBase accession | None |
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| Sequence |
0- AACAGUAAGAGUUUAUGUGCUGU -23
Get sequence
|
|---|
| Star sequence |
Loc-Mir-2184_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- AGCGCAUAGCCUCUUACAGUGCA -62
Get sequence
|
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