| MirGeneDB ID | Cmi-Mir-2184-v1 |
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| Family name |
MIR-2184 (all species) |
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| Seed |
ACAGUAA |
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| Species |
Australian ghostshark (Callorhinchus milii) |
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| MiRBase ID |
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| Paralogues |
Cmi-Mir-2184-v2
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| Orthologues |
Ami-Mir-2184
Cpi-Mir-2184
Gga-Mir-2184
Gmo-Mir-2184
Lch-Mir-2184
Loc-Mir-2184
Mun-Mir-2184
Xtr-Mir-2184
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Gnathostomata
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Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635901.1: 1948840-1948897 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACUGAUGGACAAACUCGGCUGGUUUCACAGAACAGUAAGAGUUUAUGUGCUGUGGACAGUGGGUCAGCACAUAAACUCCUACAGUUCAGAGAGGCAAGUCACGCCGACUUCACCACCA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
ACUGAUGGACAAACUCG--| G ACA A A UGGAC
GCU GUUUC GAAC GUA GAGUUUAUGUGCUG A
UGA CGGAG CUUG CAU CUCAAAUACACGAC G
ACCACCACUUCAGCCGCAC^ A AGA A C UGGGU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
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| Mature sequence |
Cmi-Mir-2184-v1_5p |
| mirBase accession | None |
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| Sequence |
0- AACAGUAAGAGUUUAUGUGCUG -22
Get sequence
|
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| Star sequence |
Cmi-Mir-2184-v1_3p* |
| mirBase accession | None |
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| Sequence |
36- GCACAUAAACUCCUACAGUUCA -58
Get sequence
|
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