| MirGeneDB ID | Mal-Mir-2184-P2 |
|---|
| Family name |
MIR-2184 (all species) |
|---|
| Seed |
ACAGUAA |
|---|
| Species |
Asian swamp eel (Monopterus albus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Mal-Mir-2184-P1
|
|---|
| Orthologues |
Ami-Mir-2184
Cpi-Mir-2184
Gga-Mir-2184
Gmo-Mir-2184
Lch-Mir-2184
Loc-Mir-2184
Mun-Mir-2184
Xtr-Mir-2184
|
|---|
| Node of Origin (locus) |
Clupeocephala
|
|---|
| Node of Origin (family) |
Gnathostomata
|
|---|
Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884840.1: 363423-363481 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCAAUUUUAUGAUCUCAGUCUUGGGCUCUGAACAGUAAGAGUUUAUGUGCUGCUAGAAAGAAGCUCAGCAUGUAGAGUCUUACAGUGCAGAGACAAAGACCAGGCAUCUCUAAAAAAAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCAAUUUUAUGAUCUCA--| GGG A A G CUAGAA
GUCUU CUCUG AC GUAAGA UUUAUGUGCUG \
CAGAA GAGAC UG CAUUCU AGAUGUACGAC A
GAAAAAAAUCUCUACGGAC^ ACA G A G UCGAAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Mal-Mir-2184-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACAGUAAGAGUUUAUGUGCUG -22
Get sequence
|
|---|
| Star sequence |
Mal-Mir-2184-P2_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- GCAUGUAGAGUCUUACAGUGCA -59
Get sequence
|
|---|
