MirGeneDB 2.1
MirGeneDB ID

Dpu-Mir-29-P2h

Family name MIR-29 (all species)
Seed UAGCACC
Species Common water flea (Daphnia pulex)
MiRBase ID
Paralogues Dpu-Mir-29-P2g 
Orthologues Aae-Mir-29-P2h  Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2h  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2h  Dma-Mir-29-P2h  Dme-Mir-29-P2h  Dmo-Mir-29-P2h  Dsi-Mir-29-P2h  Dya-Mir-29-P2h  Esc-Mir-29-P2  Hme-Mir-29-P2h  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Tca-Mir-29-P2h  Xbo-Mir-29-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_32: 69280-69354 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2h)		 Mir-965 DAPPUscaffold_32: 27782-27843 [-] Ensembl
Mir-279-o2 DAPPUscaffold_32: 68663-68726 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUUGUGUGUGUGUACACAGCCCCCCAGUGCUGAGUCUAGUGGAUGAUGUGCUAGACAUUUUAGCUUGAAUUCUUGGUUGCAUAGCACCACGGGAUUCAGCCGCUGGUGUGUCGUGGUUUUAUAUUUUAUUCAU
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Structure
        10          20        30         40        50        60       
UGUUUGUGUGUGUGUAC--  A  CCC     -|        A    A  A     UAGACAUUUUAGC 
                   AC GC   CCAGU GCUGAGUCU GUGG UG UGUGC             \
                   UG UG   GGUCG CGACUUAGG CACC AC AUACG             U
UACUUAUUUUAUAUUUUGG  C  UGU     C^        G    -  G     UUGGUUCUUAAGU 
   130       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Dpu-Mir-29-P2h_5p*
mirBase accessionNone
Sequence 
0- GCUGAGUCUAGUGGAUGAUGUGC -23
Get sequence
Mature sequence

Dpu-Mir-29-P2h_3p
mirBase accessionNone
Sequence 
52- AUAGCACCACGGGAUUCAGCCGC -75
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