MirGeneDB 2.1
MirGeneDB ID

Aae-Mir-29-P2h

Family name MIR-29 (all species)
Seed AGCACCA
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-998
Paralogues Aae-Mir-29-P1 
Orthologues Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2h  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2h  Dma-Mir-29-P2h  Dme-Mir-29-P2h  Dmo-Mir-29-P2h  Dpu-Mir-29-P2h  Dsi-Mir-29-P2h  Dya-Mir-29-P2h  Esc-Mir-29-P2  Hme-Mir-29-P2h  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Tca-Mir-29-P2h  Xbo-Mir-29-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Aaeg_L3)		 supercont1.744: 322296-322358 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-29-P2h)		 Mir-2-P7 supercont1.744: 322020-322083 [+] Ensembl
Mir-29-P2h supercont1.744: 322296-322358 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUAGCCGGCUAAAAAGAACCAAUACCCGAACUGAACUCUCGUGGGUCUGCAGUUGAUAUUUCGAAAGCUUGUAGCACCAUGAGAUUCAGCUCCGGUGUUGGUUCGUUUCCUAAGGAGAAGGG
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Structure
        10          20        30        40        50        60 
GGUAGCCGGCUAAAAAG--|         C  A     C        GU     GUUGAUAU 
                   AACCAAUACC GA CUGAA UCUCGUGG  CUGCA        U
                   UUGGUUGUGG CU GACUU AGAGUACC  GAUGU        U
GGGAAGAGGAAUCCUUUGC^         C  C     -        AC     UCGAAAGC 
 120       110       100        90         80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
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Star sequence

Aae-Mir-29-P2h_5p*
mirBase accessionNone
Sequence 
0- ACUGAACUCUCGUGGGUCUGCA -22
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Mature sequence

Aae-Mir-29-P2h_3p
mirBase accessionMIMAT0014227
Sequence 
42- UAGCACCAUGAGAUUCAGCUC -63
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