MirGeneDB 2.1
MirGeneDB ID

Dpu-Mir-29-P2g

Family name MIR-29 (all species)
Seed AGCACCA
Species Common water flea (Daphnia pulex)
MiRBase ID dpu-mir-285
Paralogues Dpu-Mir-29-P2h 
Orthologues Asu-Mir-29-P2  Bfl-Mir-29-P2  Bge-Mir-29-P2g  Bla-Mir-29-P2  Cbr-Mir-29-P2  Cel-Mir-29-P2  Cgi-Mir-29-P2  Cin-Mir-29-P2  Csc-Mir-29-P2  Cte-Mir-29-P2  Dan-Mir-29-P2g  Dma-Mir-29-P2g  Dme-Mir-29-P2g  Dmo-Mir-29-P2g  Dsi-Mir-29-P2g  Dya-Mir-29-P2g  Esc-Mir-29-P2  Isc-Mir-29-P2  Lgi-Mir-29-P2  Npo-Mir-29-P2  Obi-Mir-29-P2  Ovu-Mir-29-P2  Pfl-Mir-29-P2  Pmi-Mir-29-P2  Sko-Mir-29-P2  Spu-Mir-29-P2  Tca-Mir-29-P2g  Xbo-Mir-29-P2 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Daphnia_pulex.V1.0)		 DAPPUscaffold_1: 332511-332576 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCAAGGAAGAAACAGAGGAGCUGGGAUCACUGAAUUCUUUUGAUGCCUAGAUGUAGUUUGUGACUAGAACUCUAGCACCAUUGGAAUUCAGUUUACCCUGGCUGGCGCAAUUCGUCGGUGUUUU
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Structure
        10        20         30         40        50        60   
UCUCAAGGAAGAAACAGAGG-   UG  AUC-|         UU  A   C    UGUAGUUUG 
                     AGC  GG    ACUGAAUUCU  UG UGC UAGA         \
                     UCG  CC    UGACUUAAGG  AC ACG AUCU         U
UUUUGUGGCUGCUUAACGCGG   GU  CAUU^         UU  C   -    CAAGAUCAG 
    120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Star sequence

Dpu-Mir-29-P2g_5p*
mirBase accessionNone
Sequence 
0- ACUGAAUUCUUUUGAUGCCUAGA -23
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Mature sequence

Dpu-Mir-29-P2g_3p
mirBase accessionMIMAT0012656
Sequence 
44- UAGCACCAUUGGAAUUCAGUUU -66
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