MirGeneDB 2.1
MirGeneDB ID

Cfa-Mir-28-P2

Family name MIR-28 (all species)
Seed CGAGGAG
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-151
Paralogues Cfa-Mir-28-P1  Cfa-Mir-28-P3 
Orthologues Bta-Mir-28-P2  Cpo-Mir-28-P2  Dno-Mir-28-P2  Ete-Mir-28-P2  Hsa-Mir-28-P2  Mml-Mir-28-P2  Mmu-Mir-28-P2  Ocu-Mir-28-P2  Rno-Mir-28-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(canFam3_add)		 chr13: 35353689-35353744 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAAGAGGACUACAGCACCUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAGCCCUACUAGACUGAGGCUCCUUGAGGGCAGGGAUCGUCAUACUCGCCUCAGUGCUG
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Structure
        10          20        30        40        50        
GGCAAGAGGACUACAGC--| CU                   CA          UGUCU 
                   AC  UUCCUGCCCUCGAGGAGCU  CAGUCUAGUA     \
                   UG  AGGGACGGGAGUUCCUCGG  GUCAGAUCAU     C
GUCGUGACUCCGCUCAUAC^ CU                   A-          CCCGA 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-28-P2_5p
mirBase accessionMIMAT0006615
Sequence 
0- UCGAGGAGCUCACAGUCUAGUA -22
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Proposed targets TargetScanVert: cfa-miR-151
miRDB: MIMAT0006615
Co-mature sequence

Cfa-Mir-28-P2_3p
mirBase accessionNone
Sequence 
35- CUAGACUGAGGCUCCUUGAGG -56
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