MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-28-P2

Family name MIR-28 (all species)
Seed UAGACUG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-151
Paralogues Cpo-Mir-28-P1  Cpo-Mir-28-P3 
Orthologues Bta-Mir-28-P2  Cfa-Mir-28-P2  Dno-Mir-28-P2  Ete-Mir-28-P2  Hsa-Mir-28-P2  Mml-Mir-28-P2  Mmu-Mir-28-P2  Ocu-Mir-28-P2  Rno-Mir-28-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_17: 36727980-36728035 [+] UCSC
Precursor
(pre-Mir +30nt flank)
ACACAGAUGACCGAAGCACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCUAUCCUACUAGACUGAGGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUCGGUGUUG
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Structure
        10          20        30        40        50        
ACACAGAUGACCGAAGC--| UU      C            CA          UGUCU 
                   AC  UUCCUG CCUCGAGGAGCU  CAGUCUAGUA     \
                   UG  AGGGAC GGAGUUCCUCGG  GUCAGAUCAU     C
GUUGUGGCUCCACUCAUAC^ CU      A            A-          CCUAU 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Cpo-Mir-28-P2_5p*
mirBase accessionMIMAT0047030
Sequence 
0- UCGAGGAGCUCACAGUCUAGUA -22
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Mature sequence

Cpo-Mir-28-P2_3p
mirBase accessionMIMAT0047031
Sequence 
35- CUAGACUGAGGCUCCUUGAGG -56
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