MirGeneDB 2.1
MirGeneDB ID

Mmu-Mir-28-P2

Family name MIR-28 (all species)
Seed CGAGGAG
Species House mouse (Mus musculus)
MiRBase ID mmu-mir-151
Paralogues Mmu-Mir-28-P1  Mmu-Mir-28-P3 
Orthologues Bta-Mir-28-P2  Cfa-Mir-28-P2  Cpo-Mir-28-P2  Dno-Mir-28-P2  Ete-Mir-28-P2  Hsa-Mir-28-P2  Mml-Mir-28-P2  Ocu-Mir-28-P2  Rno-Mir-28-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(mm10)		 chr15: 73254820-73254875 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGCACAGAUGAUGGAGCGCUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCCUCCCUACUAGACUGAGGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUCCUGCCAG
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Structure
        10           20        30        40        50        
GAGCACAGAUGAUGGAG---| CU      C            CA          UGUCU 
                    CG  UUCCUG CCUCGAGGAGCU  CAGUCUAGUA     \
                    GC  AGGGAC GGAGUUCCUCGG  GUCAGAUCAU     C
GACCGUCCUCCACUCAUACU^ U-      A            A-          CCCUC 
    110       100         90        80         70        60
Deep sequencing
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CommentThe highest expression of the 3p arm has a 1 nt addition of an "A." However when seen the 3' offset reads suggests that this is the correct Drosha cut.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Bo Br Br Ce Em Em He In Ki Li Lu Mu Ov Pa Sk Sp Sp Te
Mature sequence

Mmu-Mir-28-P2_5p
mirBase accessionMIMAT0004536
Sequence 
0- UCGAGGAGCUCACAGUCUAGUA -22
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Proposed targets microrna.org: MIMAT0004536
TargetScanVert: mmu-miR-151-5p
miRDB: MIMAT0004536
Co-mature sequence

Mmu-Mir-28-P2_3p
mirBase accessionMIMAT0000161
Sequence 
35- CUAGACUGAGGCUCCUUGAGG -56
Get sequence
Proposed targets microrna.org: MIMAT0000161
TargetScanVert: mmu-miR-151-3p
miRDB: MIMAT0000161