| MirGeneDB ID | Bta-Mir-28-P2 |
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| Family name |
MIR-28 (all species) |
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| Seed |
CGAGGAG |
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| Species |
Cow (Bos taurus) |
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| MiRBase ID |
bta-mir-151
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| Paralogues |
Bta-Mir-28-P1
Bta-Mir-28-P3
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| Orthologues |
Cfa-Mir-28-P2
Cpo-Mir-28-P2
Dno-Mir-28-P2
Ete-Mir-28-P2
Hsa-Mir-28-P2
Mml-Mir-28-P2
Mmu-Mir-28-P2
Ocu-Mir-28-P2
Rno-Mir-28-P2
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037341.1: 3002383-3002439 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGGCAGGAGGACCAGACACUUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUACGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUUGGUGUCG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGGCAGGAGGACCAGAC--| UU C CA CGUCU
AC UUCCUG CCUCGAGGAGCU CAGUCUAGUA C
UG AGGGAC GGAGUUCCUCGA GUCAGAUCAU A
GCUGUGGUUCCACUCAUAC^ CU A A- CCCCU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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| Mature sequence |
Bta-Mir-28-P2_5p |
| mirBase accession | MIMAT0003523 |
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| Sequence |
0- UCGAGGAGCUCACAGUCUAGUA -22
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-151-5p
|
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| Star sequence |
Bta-Mir-28-P2_3p* |
| mirBase accession | MIMAT0003524 |
|---|
| Sequence |
36- CUAGACUGAAGCUCCUUGAGG -57
Get sequence
|
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| Proposed targets |
TargetScanVert: bta-miR-151-3p
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