MirGeneDB 2.1
MirGeneDB ID

Cel-Mir-242

Family name MIR-242 (all species)
Seed UGCGUAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-242
Paralogues
Orthologues Bfl-Mir-242  Bla-Mir-242-v1  Bla-Mir-242-v2  Bpl-Mir-242  Cbr-Mir-242  Cgi-Mir-242  Cte-Mir-242  Lan-Mir-242  Lgi-Mir-242-P1  Lgi-Mir-242-P2  Npo-Mir-242  Pfl-Mir-242  Pmi-Mir-242  Sko-Mir-242  Spu-Mir-242 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrIV: 4274262-4274320 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAUAGUUCCCUCGUGGCUCGCGAGAGUAUUGCGUAGGCCUUUGCUUCGAGAGAGAAGCUUCAGUUCGCAGCAAUAUCCUCCGCAAAACUUUCCCCGGCUAUGCAAAAAAUGGUAAGA
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Structure
        10          20        30        40        50         
UGAAUAGUUCCCUCGUG--|  CGC      A     U   CCU     U   GAGAGAA 
                   GCU   GAGAGU UUGCG AGG   UUGCU CGA       \
                   CGG   CUUUCA AACGC UCC   AACGA GCU       G
AGAAUGGUAAAAAACGUAU^  CCC      A     C   UAU     C   UGACUUC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Wt Da Ea Mi Yo Yo
Mature sequence

Cel-Mir-242_5p
mirBase accessionMIMAT0000298
Sequence 
0- UUGCGUAGGCCUUUGCUUCGA -21
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Proposed targets microrna.org: MIMAT0000298
TargetScanWorm: cel-miR-242
Star sequence

Cel-Mir-242_3p*
mirBase accessionNone
Sequence 
38- GCAGCAAUAUCCUCCGCAAAA -59
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