MirGeneDB 2.1
MirGeneDB ID

Cbr-Mir-242

Family name MIR-242 (all species)
Seed UGCGUAG
Species Roundworm (Caenorhabditis briggsae)
MiRBase ID cbr-mir-242
Paralogues
Orthologues Bfl-Mir-242  Bla-Mir-242-v1  Bla-Mir-242-v2  Bpl-Mir-242  Cel-Mir-242  Cgi-Mir-242  Cte-Mir-242  Lan-Mir-242  Lgi-Mir-242-P1  Lgi-Mir-242-P2  Npo-Mir-242  Pfl-Mir-242  Pmi-Mir-242  Sko-Mir-242  Spu-Mir-242 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(CB4)		 II: 15031468-15031526 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCAAUUCUUCUAAGCCAAAAAAAGAAUAUUGCGUAGGCCUUUGUUUCGAAAGACCCAAAAAUUGUUCGCAGCAAUCUCCUUCGCAAUAUUUUUUGGAAGAGGAAAUGUGCCACAAAU
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Structure
        10        20         30        40        50         
UGGCAAUUCUUCUAAGCCAAAA-|            U   CCU     U    AGACCC 
                       AAAGAAUAUUGCG AGG   UUGUU CGAA      A
                       UUUUUUAUAACGC UCC   AACGA GCUU      A
UAAACACCGUGUAAAGGAGAAGG^            U   UCU     C    GUUAAA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14 15 16 Cb Ea Ma Yo
Mature sequence

Cbr-Mir-242_5p
mirBase accessionMIMAT0004296
Sequence 
0- UUGCGUAGGCCUUUGUUUCGAA -22
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Star sequence

Cbr-Mir-242_3p*
mirBase accessionNone
Sequence 
37- UCGCAGCAAUCUCCUUCGCAAU -59
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