MirGeneDB 2.1
MirGeneDB ID

Bta-Mir-873-v1

Family name MIR-873 (all species)
Seed GCAGGAA
Species Cow (Bos taurus)
MiRBase ID bta-mir-873
Paralogues Bta-Mir-873-v2 
Orthologues Cfa-Mir-873-v1  Cpo-Mir-873-v1  Dno-Mir-873-v1  Ete-Mir-873-v1  Hsa-Mir-873-v1  Mdo-Mir-873-v1  Mml-Mir-873-v1  Mmu-Mir-873-v1  Oan-Mir-873-v1  Ocu-Mir-873-v1  Rno-Mir-873-v1 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037335.1: 15215608-15215666 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-873-v1)		 Mir-873-v1 NC_037335.1: 15215608-15215666 [+] UCSC Ensembl
Mir-873-v2 NC_037335.1: 15215609-15215665 [+] UCSC Ensembl
Mir-876 NC_037335.1: 15239274-15239332 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGUGCCUGCUUACUGAGUUUGUGUGCAUUUGCAGGAACUUGUGAGUCUCCUAUUGAACAUGAACAGGAGGCUGAUGAGUUCCCGGGAACACCCACAAAUCUUCCUACUCAUUUCUCCU
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Structure
        10          20        30        40        50         
GGGUGCCUGCUUACUGA--|      UGCAUUUGCA      UG G        AUUGAA 
                   GUUUGUG          GGAACU  U AGUCUCCU      \
                   UAAACAC          CCUUGA  A UCGGAGGA      C
UCCUCUUUACUCAUCCUUC^      CCACAAGGGC      GU G        CAAGUA 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Cd Fe Bo Br Ce Co Co De He Hy Ir Ki La Lo No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-873-v1_5p
mirBase accessionMIMAT0009377
Sequence 
0- UGCAGGAACUUGUGAGUCUCCU -22
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Proposed targets TargetScanVert: bta-miR-873
Star sequence

Bta-Mir-873-v1_3p*
mirBase accessionNone
Sequence 
37- GAGGCUGAUGAGUUCCCGGGAA -59
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