MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-30-P2a

Family name MIR-30 (all species)
Seed GUAAACA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-30b
Paralogues Aca-Mir-30-P1a  Aca-Mir-30-P1b  Aca-Mir-30-P1d  Aca-Mir-30-P2b  Aca-Mir-30-P2d 
Orthologues Ami-Mir-30-P2a  Bta-Mir-30-P2a  Cfa-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dno-Mir-30-P2a  Dre-Mir-30-P2a  Ete-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mal-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmu-Mir-30-P2a  Mun-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 4: 1747987-1748046 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-30-P2a)		 Mir-30-P2a 4: 1747987-1748046 [-] UCSC Ensembl
Mir-30-P1a 4: 1751122-1751178 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAGUAUUGUUACUACUGAUUUUUAGUUCAUGUAAACAUCCUACACUCAGCUGUAUCACAUGAAAUGGCUGGGAGAUGAAUGUUUACUUCAACUGAUUUGGACAGGCGGCCUUCCAGAAU
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Structure
        10        20          30        40        50         
UUAGUAUUGUUACUACUGAUUU--|     CAU        CCUACA       GUAUCA 
                        UUAGUU   GUAAACAU      CUCAGCU      C
                        AGUCAA   CAUUUGUA      GGGUCGG      A
UAAGACCUUCCGGCGGACAGGUUU^     CUU        AGUAGA       UAAAGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Sk To Wh
Mature sequence

Aca-Mir-30-P2a_5p
mirBase accessionMIMAT0021922
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
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Star sequence

Aca-Mir-30-P2a_3p*
mirBase accessionMIMAT0021923
Sequence 
38- CUGGGAGAUGAAUGUUUACUUC -60
Get sequence