Mir-2-P2

MirGeneDB ID

Aae-Mir-2-P2

Family name

MIR-2 (all species)

Seed

AUCACAG

Species

Yellow fever mosquito (Aedes aegypti)

MiRBase ID

aae-mir-13

Paralogues

Aae-Mir-2-P1-v1 Aae-Mir-2-P1-v2 Aae-Mir-2-P3 Aae-Mir-2-P4-v1 Aae-Mir-2-P4-v2 Aae-Mir-2-P5a Aae-Mir-2-P5b Aae-Mir-2-P7 Aae-Mir-2-P8

Orthologues

Bge-Mir-2-P2 Csc-Mir-2-P2o Dan-Mir-2-P2a Dan-Mir-2-P2b1 Dan-Mir-2-P2b2 Dma-Mir-2-o2 Dma-Mir-2-P2 Dme-Mir-2-P2a Dme-Mir-2-P2b1 Dme-Mir-2-P2b2 Dmo-Mir-2-P2a Dmo-Mir-2-P2b1 Dmo-Mir-2-P2b2 Dpu-Mir-2-o2 Dpu-Mir-2-P2 Dsi-Mir-2-P2a Dsi-Mir-2-P2b1 Dsi-Mir-2-P2b2 Dya-Mir-2-P2a Dya-Mir-2-P2b1 Dya-Mir-2-P2b2 Hme-Mir-2-P2c Hme-Mir-2-P2d Lpo-Mir-2-P2g Lpo-Mir-2-P2h Lpo-Mir-2-P2j Lpo-Mir-2-P2l Lpo-Mir-2-P2m Tca-Mir-2-P2e Tca-Mir-2-P2f

Node of Origin (locus)

Endopterygota

Node of Origin (family)

Protostomia

Genome context
(Aaeg_L3)

supercont1.268: 888744-888807 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-2-P2)

Mir-2-P4-v1 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P4-v2 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P3 supercont1.268: 888597-888663 [-] Ensembl
Mir-2-P2 supercont1.268: 888744-888807 [-] Ensembl
Mir-2-P1-v1 supercont1.268: 889091-889155 [-] Ensembl
Mir-2-P1-v2 supercont1.268: 889091-889155 [-] Ensembl
Mir-71 supercont1.268: 889383-889449 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

AACCAGAACCUGUGUCCAGUCGUGAUCGGAUCGUAAAAAUGGUUGUGCUGUGUUGUUACGCUCGAAAUUCAUAUCACAGCCAUUUUGACGAGUUCGAUCCUGGAUCGUUAUAGUCGCCUUCGUC

Get precursor sequence

Structure

        10          20        30         40        50        60 
AACCAGAACCUGUGUCCAG--   U       -|   A            C    UUGUUACG 
                     UCG GAUCGGA UCGU AAAAUGGUUGUG UGUG        \
                     GGU CUAGCUU AGCA UUUUACCGACAC AUAC        C
CUGCUUCCGCUGAUAUUGCUA   C       G^   G            U    UUAAAGCU 
  120       110       100        90        80        70