MirGeneDB 2.1
MirGeneDB ID

Dma-Mir-2-P2

Family name MIR-2 (all species)
Seed AUCACAG
Species Large common water flea (Daphnia magna)
MiRBase ID
Paralogues Dma-Mir-2-o1  Dma-Mir-2-o2  Dma-Mir-2-P1  Dma-Mir-2-P3  Dma-Mir-2-P4 
Orthologues Aae-Mir-2-P2  Bge-Mir-2-P2  Csc-Mir-2-P2o  Dan-Mir-2-P2a  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dme-Mir-2-P2a  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2a  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2a  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2a  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Hme-Mir-2-P2c  Hme-Mir-2-P2d  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Tca-Mir-2-P2e  Tca-Mir-2-P2f 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(DMA_ASM399081)		 NC_046175.1: 11973770-11973832 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CGGCGACAAAGAAACGACAUUUGCGCCGCUCGUCGGAAAGGCUGUGGUGUGUUGCUAUUACAUAAUUUUCAUAUCACAGCCAUUCUAGAUGCGCGGAGCUGCCGGAAUAACUCAAAACCCUUG
Get precursor sequence
Structure
        10        20          30         40        50        60
CGGCGACAAAGAAACGACAUUU--  G    U    -|   A            UUGCUAUU 
                        GC CCGC CGUC GGAA GGCUGUGGUGUG        A
                        CG GGCG GUAG UCUU CCGACACUAUAC        C
GUUCCCAAAACUCAAUAAGGCCGU  A    C    A^   A            UUUUAAUA 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
01 02 03 04 05 06 07 08 09 10 11 12 13 14
Star sequence

Dma-Mir-2-P2_5p*
mirBase accessionNone
Sequence 
0- CGUCGGAAAGGCUGUGGUGUG -21
Get sequence
Mature sequence

Dma-Mir-2-P2_3p
mirBase accessionNone
Sequence 
41- UAUCACAGCCAUUCUAGAUGCG -63
Get sequence