MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-362-P3

Family name MIR-362 (all species)
Seed AUGCACC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-501
Paralogues Rno-Mir-362-P1  Rno-Mir-362-P4 
Orthologues Cpo-Mir-362-P3  Hsa-Mir-362-P3  Mml-Mir-362-P3  Mmu-Mir-362-P3  Ocu-Mir-362-P3 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chrX: 16117887-16117946 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-362-P3)		 Mir-188-P2 chrX: 16109880-16109938 [+] UCSC Ensembl
Mir-188-P1 chrX: 16110280-16110339 [+] UCSC Ensembl
Mir-362-P1 chrX: 16117174-16117232 [+] UCSC Ensembl
Mir-362-P3 chrX: 16117887-16117946 [+] UCSC Ensembl
Mir-362-P4 chrX: 16121342-16121402 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGGGCCUUCUGCUCUGCUCGUCCUCUCUAAUCCUUUGUCCCUGGGUGAAAAUGCUAUUUGUAUGCAAUGCACCCGGGCAAGGAUUUGGGGAAGGUAAGCCUGGUCUGCAUGUGAGGAC
Get precursor sequence
Structure
        10          20        30        40        50        60
CCUGGGCCUUCUGCUCU--|  CG  C       UC     U   U     AAAAUGCUAU 
                   GCU  UC UCUCUAA  CUUUG CCC GGGUG          U
                   CGA  GG AGGGGUU  GGAAC GGG CCCAC          U
CAGGAGUGUACGUCUGGUC^  AU  A       UA     -   -     GUAACGUAUG 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Star sequence

Rno-Mir-362-P3_5p*
mirBase accessionMIMAT0003116
Sequence 
0- AAUCCUUUGUCCCUGGGUGAAAAU -24
Get sequence
Proposed targets microrna.org: MIMAT0003116
TargetScanVert: rno-miR-501-5p
miRDB: MIMAT0003116
Mature sequence

Rno-Mir-362-P3_3p
mirBase accessionMIMAT0017198
Sequence 
37- AAUGCACCCGGGCAAGGAUUUGG -60
Get sequence
Proposed targets TargetScanVert: rno-miR-501-3p
miRDB: MIMAT0017198