| MirGeneDB ID | Npo-Mir-1990 |
|---|---|
| Family name | MIR-1990 (all species) |
| Seed | GGGACUA |
| Species | Chambered Nautilus (Nautilus pompilius) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cgi-Mir-1990 Cte-Mir-1990-P1 Cte-Mir-1990-P2 Efe-Mir-1990-P1 Efe-Mir-1990-P2 Efe-Mir-1990-P3 Lan-Mir-1990 Lgi-Mir-1990 |
| Node of Origin (locus) | Lophotrochozoa |
| Node of Origin (family) | Lophotrochozoa |
| Genome context (GCA_018389105_NPO) |
JACATO010001038.1: 22720-22775 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | UUCAUUCUAAUGCAGACAGGAAGCACGCGCAGUAAGUUGAUGGGGUCCCAGGUUGCAAACAAUCCCGGGACUACGUCAACUGCUGGCGAGUGCUUCCGCCAACUACGUCGUCGUCUGet precursor sequence |
| Structure | 10 20 30 40 50 UUCAUUCUAAUGCAGACA- G -| A GG A UUGCA GGAAGCAC CG CAGUA GUUGAUG GUCCC GG \ CCUUCGUG GC GUCGU CAACUGC CAGGG CC A UCUGCUGCUGCAUCAACCG A G^ - AU C UAACA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Npo-Mir-1990_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AGUAAGUUGAUGGGGUCCCAGG -22
Get sequence
|
| Mature sequence | Npo-Mir-1990_3p (predicted) |
| mirBase accession | None |
| Sequence |
35- CGGGACUACGUCAACUGCUGG -56
Get sequence
|
