MirGeneDB 2.1
MirGeneDB ID

Lan-Mir-1990

Family name MIR-1990 (all species)
Seed GGGACUA
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues
Orthologues Cgi-Mir-1990  Cte-Mir-1990-P1  Cte-Mir-1990-P2  Efe-Mir-1990-P1  Efe-Mir-1990-P2  Efe-Mir-1990-P3  Lgi-Mir-1990  Npo-Mir-1990 
Node of Origin (locus) Lophotrochozoa
Node of Origin (family) Lophotrochozoa
Genome context
(LinAna_1.0)		 LFEI01000037: 537538-537595 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAUGUACACAGACAUAGGAGGUCUCGCGCUGUAAGUUUACAUAGUCCCAGGUUGUGACGGGUUCCCGGGACUAUGUCAACUUCCAGCUUGGCACCCUUCUCAUCACCACGCACAGUU
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Structure
        10         20         30        40        50        
AGAUGUACACAGACAUA-     UC-|  C    U     U          A  UUGUG 
                  GGAGG   UCG GCUG AAGUU ACAUAGUCCC GG     A
                  CUUCC   GGU CGAC UUCAA UGUAUCAGGG CC     C
UUGACACGCACCACUACU     CAC^  U    C     C          C  UUGGG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Lan-Mir-1990_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGUAAGUUUACAUAGUCCCAGG -22
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Mature sequence

Lan-Mir-1990_3p
mirBase accessionNone
Sequence 
36- CGGGACUAUGUCAACUUCCAGC -58
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