Mir-362-P4

MirGeneDB ID

Mml-Mir-362-P4

Family name

MIR-362 (all species)

Seed

AUGCACC

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-502

Paralogues

Mml-Mir-362-P1 Mml-Mir-362-P2-v1 Mml-Mir-362-P2-v2 Mml-Mir-362-P3 Mml-Mir-362-P5

Orthologues

Bta-Mir-362-P4 Cfa-Mir-362-P4 Cpo-Mir-362-P4 Dno-Mir-362-P4 Ete-Mir-362-P4 Hsa-Mir-362-P4 Mmu-Mir-362-P4 Ocu-Mir-362-P4 Rno-Mir-362-P4

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(rheMac8_trace)

chrX: 50021934-50021993 [+] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-362-P4)

Mir-188-P2 chrX: 50008239-50008297 [+] UCSC Ensembl
Mir-188-P1 chrX: 50008592-50008651 [+] UCSC Ensembl
Mir-362-P2-v1 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P2-v2 chrX: 50013506-50013567 [+] UCSC Ensembl
Mir-362-P1 chrX: 50014029-50014087 [+] UCSC Ensembl
Mir-362-P5 chrX: 50017286-50017346 [+] UCSC Ensembl
Mir-362-P3 chrX: 50018014-50018073 [+] UCSC Ensembl
Mir-188-P3 chrX: 50020582-50020640 [+] UCSC Ensembl
Mir-362-P4 chrX: 50021934-50021993 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCCAAGCCUUCUGCCCUGUUCUCCCUCUCUAAUCCUUGCUAUCUGGGUGCUAGUGCUGUCUCAAUGCAAUGCACCUGGGCAAGGAUUCAGAGAGGGGGAGCUCAACUGUACCAAGAAGGA

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Structure

        10          20        30         40        50        60 
CCCAAGCCUUCUGCCCU--             -|        UAU UG     UAG   UGUC 
                   GUUCUCCCUCUCU AAUCCUUGC   C  GGUGC   UGC    \
                   CGAGGGGGAGAGA UUAGGAACG   G  CCACG   ACG    U
AGGAAGAACCAUGUCAACU             C^        --- GU     UA-   UAAC 
.       110       100        90        80           70

Deep sequencing

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Comment

There is a second Drosha and Dicer cut -1 and +1 respectively to what is annotated here.

3' NTU

Motifs

UG at 5p(-14), UGUG in loop

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-362-P4_5p*

mirBase accession

MIMAT0006365

Sequence

0- AAUCCUUGCUAUCUGGGUGCUAGUGC -26

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Proposed targets

TargetScanVert: mml-miR-502-5p

Mature sequence

Mml-Mir-362-P4_3p

mirBase accession

MIMAT0006366

Sequence

37- AAUGCACCUGGGCAAGGAUUCAG -60

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Proposed targets

TargetScanVert: mml-miR-502-3p