MirGeneDB 2.1
MirGeneDB ID

Dsi-Mir-10-P4

Family name MIR-10 (all species)
Seed AAGCUCG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-993
Paralogues Dsi-Mir-10-P1  Dsi-Mir-10-P2  Dsi-Mir-10-P3 
Orthologues Aae-Mir-10-P4  Asu-Mir-10-P4  Bge-Mir-10-P4  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Cte-Mir-10-P4  Dan-Mir-10-P4  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Tca-Mir-10-P4 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 2496056-2496147 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P4)		 Mir-10-P4 3R: 2496056-2496147 [+] UCSC Ensembl
Mir-10-P1 3R: 2529742-2529804 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAUCUCCAAUUGUAACGCUCCCGUGACCUACCCUGUAGUUCCGGGCUUUUGUUUAAAUGGCGUUCGGCGCAUUGUCGGAUUGCUGGCUCGAUUAUCAGAAGCUCGUCUCUACAGGUAUCUCACAGGGUAGAAAGAAACCUCAAUGAAAAG
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Structure
        10         20          30        40        50        60        70     
GGGAUCUCCAAUUGUAACG-  -   -|   CC    C     UUC          UUUAAAUGGCGUUCGGCGCAU 
                    CU CCC GUGA  UACC UGUAG   CGGGCUUUUG                     U
                    GA GGG CACU  AUGG ACAUC   GCUCGAAGAC                     G
GAAAAGUAACUCCAAAGAAA  U   A^   CU    -     UCU          UAUUAGCUCGGUCGUUAGGCU 
150       140       130       120        110       100        90        80
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-10-P4_5p*
mirBase accessionMIMAT0012461
Sequence 
0- UACCCUGUAGUUCCGGGCUUUUG -23
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Mature sequence

Dsi-Mir-10-P4_3p
mirBase accessionMIMAT0012462
Sequence 
69- GAAGCUCGUCUCUACAGGUAUCU -92
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