MirGeneDB 2.1
MirGeneDB ID

Cte-Mir-10-P4

Family name MIR-10 (all species)
Seed GAAGCUC
Species Polychaete worm (Capitella teleta)
MiRBase ID cte-mir-993
Paralogues Cte-Mir-10-P1  Cte-Mir-10-P2  Cte-Mir-10-P3  Cte-Mir-10-P5  Cte-Mir-10-P6  Cte-Mir-10-P7 
Orthologues Aae-Mir-10-P4  Asu-Mir-10-P4  Bge-Mir-10-P4  Bpl-Mir-10-P4  Csc-Mir-10-P4q  Csc-Mir-10-P4r  Dan-Mir-10-P4  Dma-Mir-10-P4  Dme-Mir-10-P4  Dmo-Mir-10-P4  Dpu-Mir-10-P4  Dsi-Mir-10-P4  Dya-Mir-10-P4  Efe-Mir-10-P4a  Efe-Mir-10-P4b  Efe-Mir-10-P4c  Hme-Mir-10-P4  Isc-Mir-10-P4  Lan-Mir-10-P4d  Lan-Mir-10-P4e  Lpo-Mir-10-P4j  Lpo-Mir-10-P4k  Lpo-Mir-10-P4l  Lpo-Mir-10-P4m  Lpo-Mir-10-P4n  Nve-Mir-10  Tca-Mir-10-P4 
Node of Origin (locus) Protostomia
Node of Origin (family) Eumetazoa
Genome context
(Capitella_teleta_v1.0)		 CAPTEscaffold_70: 218590-218651 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-10-P4)		 Mir-10-P4 CAPTEscaffold_70: 218590-218651 [+] Ensembl
Mir-10-P1 CAPTEscaffold_70: 265131-265196 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAUCGAUGUUCCCGUUCACAUUCCGCAUGUACCCUGUAGACCCGGGUUUAUGUGUUCAUGUUUAACUUACAGAAGCUCUGUUCUACAGGUAUAUUUUGAAUGUGCUAACACCUAAUCCGUUG
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Structure
        10          20        30        40        50        60 
CAUCGAUGUUCCCGUUC--|     CGC       C      CCC      A   GUUCAUG 
                   ACAUUC   AUGUACC UGUAGA   GGGUUU UGU       \
                   UGUAAG   UAUAUGG ACAUCU   CUCGAA ACA       U
GUUGCCUAAUCCACAAUCG^     UUU       -      UGU      G   UUCAAUU 
120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cte-Mir-10-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACCCUGUAGACCCGGGUUUAUGU -23
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Mature sequence

Cte-Mir-10-P4_3p
mirBase accessionMIMAT0013529
Sequence 
40- AGAAGCUCUGUUCUACAGGUAU -62
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