Mir-383-v2

MirGeneDB ID

Tgu-Mir-383-v2

Family name

MIR-383 (all species)

Seed

AGAUCAG

Species

Zebra finch (Taeniopygia guttata)

MiRBase ID

tgu-mir-383

Paralogues

Tgu-Mir-383-v1

Orthologues

Aca-Mir-383-v2 Ami-Mir-383-v2 Bta-Mir-383-v2 Cfa-Mir-383-v2 Cli-Mir-383-v2 Cpi-Mir-383-v2 Cpo-Mir-383-v2 Dno-Mir-383-v2 Ete-Mir-383-v2 Gga-Mir-383-v2 Gja-Mir-383-v2 Hsa-Mir-383-v2 Mdo-Mir-383-v2 Mml-Mir-383-v2 Mmu-Mir-383-v2 Mun-Mir-383 Oan-Mir-383-v2 Ocu-Mir-383-v2 Pbv-Mir-383-v2 Rno-Mir-383-v2 Sha-Mir-383-v2 Spt-Mir-383 Xtr-Mir-383-v2

Node of Origin (locus)

Tetrapoda

Node of Origin (family)

Tetrapoda

Genome context
(TaeGut1_add)

4: 28763729-28763792 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-383-v2)

Mir-383-v2 4: 28763729-28763792 [-] UCSC Ensembl
Mir-383-v1 4: 28763730-28763791 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UGGAAGAGAGUUGCCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAAAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACAUCUUG

Get precursor sequence

Structure

        10         20         30        40        50        60  
UGGAAGAGAGUUGCCAAGU-   C     C-| A      AA    A       UUUGAGUAA 
                    CAC UGCUC  UC GAUCAG  GGUG UUGUGGC         \
                    GUG ACGAG  AG CUGGUC  UCAC GACACCG         A
GUUCUACAUUUUCCGAUCAU   A     AA^ A      CG    -       ACGAAUUAU 
  120       110       100        90        80         70