MirGeneDB 2.1
MirGeneDB ID

Sha-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-383
Paralogues Sha-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Ami-Mir-383-v2  Bta-Mir-383-v2  Cfa-Mir-383-v2  Cli-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Spt-Mir-383  Tgu-Mir-383-v2  Xtr-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(DEVIL_add)		 GL864737.1: 2362166-2362228 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v2)		 Mir-383-v2 GL864737.1: 2362166-2362228 [+] UCSC Ensembl
Mir-383-v1 GL864737.1: 2362167-2362228 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAGCAGAAGCUCCAAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGCAGACAUGGAACAGCCACAUCACUGGCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUGGGCCUCAC
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Structure
        10        20         30        40        50        60  
ACAGCAGAAGCUCCAAAGU   C     C-| A      AA      U      UUGGGCAG 
                   CAC UGCUC  UC GAUCAG  GGUGAU GUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCACUA CACCGA        A
CACUCCGGGUUCCGAUCCU   A     AA^ A      GG      -      CAAGGUAC 
 120       110       100        90        80         70
Deep sequencing
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CommentThere are not enough 3p reads to reliably assess whether this is a Group 2 miRNA, but this version is a Group 2 in other taxa where it can be assessed.
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-383-v2_5p
mirBase accessionMIMAT0022829
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Star sequence

Sha-Mir-383-v2_3p*
mirBase accessionNone
Sequence 
42- CCACAUCACUGGCUGGUCAGA -63
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