MirGeneDB 2.1
MirGeneDB ID

Tca-Mir-22-P2-v1

Family name MIR-22 (all species)
Seed GGCUCGU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-980
Paralogues Tca-Mir-22-P2-v2 
Orthologues Aae-Mir-22-P2  Asu-Mir-22-P2  Bge-Mir-22-P2  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Cgi-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Esc-Mir-22-P2  Hme-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lpo-Mir-22-P2a  Lpo-Mir-22-P2b  Lpo-Mir-22-P2c  Lpo-Mir-22-P2d  Npo-Mir-22-P2  Ovu-Mir-22-P2  Pfl-Mir-22-o2  Pmi-Mir-22-o2  Sko-Mir-22-o2  Spu-Mir-22-o2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 KQ972119: 1428-1488 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-22-P2-v1)		 Mir-22-P2-v1 KQ972119: 1428-1488 [+] Ensembl
Mir-22-P2-v2 KQ972119: 1429-1486 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGGUGGUUUUUUUGACAACUGGGUGCCGCAGGGCUCGUCAUGGGGUAGCUAGCGUGUGAUUAACAGCCAGCUGCCUUUUGAAGGGCUAUAUGGCAUUGGUUUUUUACUUCAAGUGUGUUUU
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Structure
        10            20        30        40        50         
UGGUGGUUUUUUUGACA----| UG G     CAG     G   UG        A  GUGUG 
                     AC  G UGCCG   GGCUC UCA  GGGUAGCU GC     A
                     UG  U ACGGU   UCGGG AGU  UCCGUCGA CG     U
UUUUGUGUGAACUUCAUUUUU^ GU -     AUA     A   UU        C  ACAAU 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-22-P2-v1_5p
mirBase accessionMIMAT0018864
Sequence 
0- GGGCUCGUCAUGGGGUAGCUAGC -23
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Co-mature sequence

Tca-Mir-22-P2-v1_3p
mirBase accessionMIMAT0018865
Sequence 
37- CAGCUGCCUUUUGAAGGGCUAUAU -61
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