MirGeneDB 2.1
MirGeneDB ID

Pfl-Mir-22-o2

Family name MIR-22 (all species)
Seed CAGCUGC
Species Ptychodera (Ptychodera flava)
MiRBase ID
Paralogues Pfl-Mir-22-P1 
Orthologues Aae-Mir-22-P2  Asu-Mir-22-P2  Bge-Mir-22-P2  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Cgi-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Esc-Mir-22-P2  Hme-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lpo-Mir-22-P2a  Lpo-Mir-22-P2b  Lpo-Mir-22-P2c  Lpo-Mir-22-P2d  Npo-Mir-22-P2  Ovu-Mir-22-P2  Pmi-Mir-22-o2  Sko-Mir-22-o2  Spu-Mir-22-o2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2 
Node of Origin (locus) Ambulacraria
Node of Origin (family) Bilateria
Genome context
(Pfl)		 LD346721.1: 582412-582474 [-]
Precursor
(pre-Mir +30nt flank)
CUCAAAUAAGUGCAAUGCUUUGCAUUGCUACACUUCACGCUGCAAGCUAUUGUCAAGUGGUUUAAAUGUCAACAGCUGCUACGUGGAGUGGAGCAAGGUCAAAGGUCAUUUCUUCCAGUCAUA
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Structure
        10          20         30        40        50        60 
CUCAAAUAAGUGCAAUG--     -|A     A         CU   A   A   UCAAGUGG 
                   CUUUG C UUGCU CACUUCACG  GCA GCU UUG        \
                   GAAAC G AACGA GUGAGGUGC  CGU CGA AAC        U
AUACUGACCUUCUUUACUG     U^G     G         AU   -   C   UGUAAAUU 
 120       110       100        90        80         70
Deep sequencing
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CommentIt is unclear if this paralogue group represents the ancestral Mir-22-P2 gene that is seed shifted or a new paralogue derived from the ancestral P1 gene. It is also unclear if this gene is orthologous to the Mir-22-o1 gene in Branchiostoma and Xenoturbella.
3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Pfl-Mir-22-o2_5p* (predicted)
mirBase accessionNone
Sequence 
0- CACUUCACGCUGCAAGCUAUUG -22
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Mature sequence

Pfl-Mir-22-o2_3p
mirBase accessionNone
Sequence 
41- ACAGCUGCUACGUGGAGUGGAG -63
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