MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-181-P1b

Family name MIR-181 (all species)
Seed ACAUUCA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-181-P1a  Sto-Mir-181-P1c  Sto-Mir-181-P2a  Sto-Mir-181-P2b  Sto-Mir-181-P2c 
Orthologues Aca-Mir-181-P1b  Ami-Mir-181-P1b  Bta-Mir-181-P1b  Cfa-Mir-181-P1b  Cli-Mir-181-P1b  Cmi-Mir-181-P1b  Cpi-Mir-181-P1b  Cpo-Mir-181-P1b  Dno-Mir-181-P1b  Dre-Mir-181-P1b2  Ete-Mir-181-P1b  Gga-Mir-181-P1b  Gja-Mir-181-P1b  Gmo-Mir-181-P1b2  Hsa-Mir-181-P1b  Lch-Mir-181-P1b  Loc-Mir-181-P1b  Mal-Mir-181-P1b2  Mdo-Mir-181-P1b  Mml-Mir-181-P1b  Mmu-Mir-181-P1b  Mun-Mir-181-P1b  Oan-Mir-181-P1b  Ocu-Mir-181-P1b  Pbv-Mir-181-P1b  Rno-Mir-181-P1b  Sha-Mir-181-P1b  Spt-Mir-181-P1b  Tgu-Mir-181-P1b  Tni-Mir-181-P1b1  Xla-Mir-181-P1b3  Xla-Mir-181-P1b4  Xtr-Mir-181-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01004985.1: 180750-180812 [-]
Precursor
(pre-Mir +30nt flank)
UCAGCUUUGGUUUUUCUGAUGGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUUGACUUUUCAAAUUAAACCAUCGACCGUUGGUUGUACCUUGAGGUCCAUUAUUGACAUGUUCACAAAA
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Structure
        10         20         30        40        50        60  
UCAGCUUUGGUUUUUCU-     -|     UGA   UU     CU       A  UUUGACUU 
                  GAUGG CUUCAG   ACA  CAACG  GUCGGUG GU        U
                  UUACC GGAGUU   UGU  GUUGC  CAGCUAC CA        U
AAAACACUUGUACAGUUA     U^     CCA   UG     --       -  AAUUAAAC 
 120       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-181-P1b_5p
mirBase accessionNone
Sequence 
0- AACAUUCAACGCUGUCGGUGAGU -23
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Star sequence

Sto-Mir-181-P1b_3p*
mirBase accessionNone
Sequence 
41- ACCAUCGACCGUUGGUUGUACC -63
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