MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-615
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Cpo-Mir-615  Ete-Mir-615  Hsa-Mir-615  Mml-Mir-615  Mmu-Mir-615  Ocu-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr7: 144629035-144629098 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-615)		 Mir-196-P4 chr7: 144584259-144584317 [+] UCSC Ensembl
Mir-615 chr7: 144629035-144629098 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGAUUCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGGGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCAUCCCCCCUCAGCCCCUCCGGCC
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Structure
        10          20         30        40        50        60  
AGGAUUCCAGCGACUCG--   -|   C          UC     U         UCGAGGGUG 
                   GGA GGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                   CCU CCCC CCUUCUCCCU  GGGUC CGAGCCUGG         C
CCGGCCUCCCCGACUCCCC   A^   -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Star sequence

Rno-Mir-615_5p*
mirBase accessionMIMAT0012835
Sequence 
0- GGGGGUCCCCGGUGCUCGGAUC -22
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Proposed targets microrna.org: MIMAT0012835
TargetScanVert: rno-miR-615
miRDB: MIMAT0012835
Mature sequence

Rno-Mir-615_3p
mirBase accessionNone
Sequence 
43- UCCGAGCCUGGGUCUCCCUCU -64
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