MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-615

Family name MIR-615 (all species)
Seed CCGAGCC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-615
Paralogues
Orthologues Bta-Mir-615  Cfa-Mir-615  Ete-Mir-615  Hsa-Mir-615  Mml-Mir-615  Mmu-Mir-615  Ocu-Mir-615  Rno-Mir-615 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_9: 45777680-45777743 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-615)		 Mir-615 scaffold_9: 45777680-45777743 [-] UCSC
Mir-196-P4 scaffold_9: 45819379-45819437 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AGGAUCCCAGCGACUCGGGAGGGGCGGGAGGGGGGUCCCCGGUGCUCGGAUCUCGAGAGUGCUUAUUGUUCGGUCCGAGCCUGGGUCUCCCUCUUCCCCCCACACCCCCCUCAGCCCUCCGGCU
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Structure
        10        20           30        40        50        60  
AGGAUCCCAGCGACUCGGGA---|   C          UC     U         UCGAGAGUG 
                       GGGG GGGAGGGGGG  CCCGG GCUCGGAUC         \
                       CCCC CCUUCUCCCU  GGGUC CGAGCCUGG         C
UCGGCCUCCCGACUCCCCCCACA^   -          CU     -         CUUGUUAUU 
  120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cpo-Mir-615_5p* (predicted)
mirBase accessionMIMAT0047353
Sequence 
0- GGGGGUCCCCGGUGCUCGGAUC -22
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Mature sequence

Cpo-Mir-615_3p
mirBase accessionMIMAT0047354
Sequence 
43- UCCGAGCCUGGGUCUCCCUCU -64
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