MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-592

Family name MIR-592 (all species)
Seed UGUGUCA
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-592
Paralogues
Orthologues Bta-Mir-592  Cfa-Mir-592  Cpo-Mir-592  Dno-Mir-592  Ete-Mir-592  Hsa-Mir-592  Mml-Mir-592  Mmu-Mir-592  Ocu-Mir-592 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 chr4: 55182387-55182447 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUUAAUUUCAUGAUAUUAUGCCAUGGCAUUGUGUCAAUAUGCGAUGAUGUGUUGUGAUGGCACAGCGUCAUCACGUGGUGACGCAACAUCAUGACGUAAGACAUCACAUCGCCAAUUAA
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Structure
        10           20        30        40        50         
UAAUUAAUUUCAUGAUA---|    C     CA        A    C        GUUGUG 
                    UUAUG CAUGG  UUGUGUCA UAUG GAUGAUGU      A
                    AAUGC GUACU  AACGCAGU GUGC CUACUGCG      U
AAUUAACCGCUACACUACAG^    A     AC        G    A        ACACGG 
 .       110       100        90        80        70        60
Deep sequencing
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CommentMir-592 was classified in Fromm et al. (2015) as a non-canonical miRNA as the Dicer cut is always +3 but given the conservation of the sequence and that it is clearly processed by Drosha it is accepted here as a bona fide miRNA.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-592_5p
mirBase accessionMIMAT0012834
Sequence 
0- UUGUGUCAAUAUGCGAUGAUGU -22
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Proposed targets microrna.org: MIMAT0012834
TargetScanVert: rno-miR-592
miRDB: MIMAT0012834
Star sequence

Rno-Mir-592_3p* (predicted)
mirBase accessionNone
Sequence 
39- UCAUCACGUGGUGACGCAACAU -61
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