MirGeneDB 2.1
MirGeneDB ID

Rno-Mir-452-v1

Family name MIR-452 (all species)
Seed ACUGUUU
Species Norway rat (Rattus norvegicus)
MiRBase ID rno-mir-452
Paralogues Rno-Mir-452-v2 
Orthologues Bta-Mir-452-v1  Cfa-Mir-452-v1  Cpo-Mir-452-v1  Ete-Mir-452-v1  Hsa-Mir-452-v1  Mml-Mir-452-v1  Mmu-Mir-452-v1  Ocu-Mir-452-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)		 928997776: 329-389 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-452-v1)		 Mir-452-v1 928997776: 329-389 [-] UCSC Ensembl
Mir-452-v2 928997776: 330-386 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUCUCUCUCAUAUAUGCUAAACACUUACAACUGUUUGCAGAGGAAACUGAGACUUCAUAGCUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCCCCUUGAAGGACGG
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Structure
        10          20        30        40        50        60 
GCUUCUCUCUCAUAUAU--| U  A       AA  GU       G  A       CUUCAU 
                   GC AA CACUUAC  CU  UUGCAGA GA ACUGAGA      \
                   CG UU GUGAAUG  GA  AACGUCU CU UGACUCU      A
GGCAGGAAGUUCCCCGAAC^ U  C       AA  --       A  C       GUAUCG 
 .       110       100        90          80        70
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Br Br Br Ce Ce Ce Ce Co Co Co Co Dr Dr Du Du Du Du He He Hi Hi Il Il Je Je Ki Ki Ki Ki Li Li Li Li Me Me Mu Mu Mu Mu Mu Mu Mu Mu Ov Pa Pa St St St Te Ut Wh Br Fa He Ki La Li Li Lu Mu Pa Sk Sm Sp St Te Th
Mature sequence

Rno-Mir-452-v1_5p
mirBase accessionMIMAT0035748
Sequence 
0- AACUGUUUGCAGAGGAAACUGAGA -24
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Proposed targets TargetScanVert: rno-miR-452-5p
miRDB: MIMAT0035748
Co-mature sequence

Rno-Mir-452-v1_3p
mirBase accessionMIMAT0035749
Sequence 
39- UCAGUCUCAUCUGCAAAGAAGU -61
Get sequence
Proposed targets TargetScanVert: rno-miR-452-3p
miRDB: MIMAT0035749