| MirGeneDB ID | Ete-Mir-452-v1 |
|---|
| Family name |
MIR-452 (all species) |
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| Seed |
ACUGUUU |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
|
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| Paralogues |
Ete-Mir-452-v2
|
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| Orthologues |
Bta-Mir-452-v1
Cfa-Mir-452-v1
Cpo-Mir-452-v1
Hsa-Mir-452-v1
Mml-Mir-452-v1
Mmu-Mir-452-v1
Ocu-Mir-452-v1
Rno-Mir-452-v1
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(echTel2) |
JH980398: 3996459-3996519 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
GCUCCCAUUUUAUAAAUGCAAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUAUAACCAUGCCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAUCCCUCAAAAGGGUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCUCCCAUUUUAUAAAU--| AA GU G A ACUUUAU
GCAAAGCACUUAC CU UUGCAGA GA ACUGAG \
CGUUUCGUGAAUG GA AACGUCU CU UGACUC A
GAUGGGAAAACUCCCUAAC^ AA -- A C CGUACCA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Ete-Mir-452-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AACUGUUUGCAGAGGAAACUGAGA -24
Get sequence
|
|---|
| Star sequence |
Ete-Mir-452-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UCAGUCUCAUCUGCAAAGAAGU -61
Get sequence
|
|---|
